From 8d8d1a19f0c69b53d5ed8d9f6592dfa4b91c23f3 Mon Sep 17 00:00:00 2001 From: Heng Li Date: Mon, 10 Nov 2014 16:04:13 -0500 Subject: [PATCH] bug with incomplete read() call See also issue #43 of seqtk --- kseq.h | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/kseq.h b/kseq.h index a5cec7c..772cdee 100644 --- a/kseq.h +++ b/kseq.h @@ -70,7 +70,7 @@ if (ks->begin >= ks->end) { \ ks->begin = 0; \ ks->end = __read(ks->f, ks->buf, __bufsize); \ - if (ks->end < __bufsize) ks->is_eof = 1; \ + if (ks->end == 0) ks->is_eof = 1; \ if (ks->end == 0) return -1; \ } \ return (int)ks->buf[ks->begin++]; \ @@ -100,7 +100,7 @@ typedef struct __kstring_t { if (!ks->is_eof) { \ ks->begin = 0; \ ks->end = __read(ks->f, ks->buf, __bufsize); \ - if (ks->end < __bufsize) ks->is_eof = 1; \ + if (ks->end == 0) ks->is_eof = 1; \ if (ks->end == 0) break; \ } else break; \ } \ -- 2.47.3