From 8c13339b6807fd317946c2933958bbcacc5f84aa Mon Sep 17 00:00:00 2001 From: Heng Li Date: Sat, 10 Sep 2011 22:21:27 -0400 Subject: [PATCH] removed an unused variable --- ksw.c | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ksw.c b/ksw.c index 79f7a94..c2b5f9c 100644 --- a/ksw.c +++ b/ksw.c @@ -92,7 +92,7 @@ ksw_query_t *ksw_qinit(int size, int qlen, const uint8_t *query, int m, const in int ksw_sse2_16(ksw_query_t *q, int tlen, const uint8_t *target, ksw_aux_t *a) // the first gap costs -(_o+_e) { - int slen, i, sum, m_b, n_b, te = -1, gmax = 0; + int slen, i, m_b, n_b, te = -1, gmax = 0; uint64_t *b; __m128i zero, gapoe, gape, shift, *H0, *H1, *E, *Hmax; @@ -118,7 +118,7 @@ int ksw_sse2_16(ksw_query_t *q, int tlen, const uint8_t *target, ksw_aux_t *a) / _mm_store_si128(Hmax + i, zero); } // the core loop - for (i = 0, sum = 0; i < tlen; ++i) { + for (i = 0; i < tlen; ++i) { int j, k, cmp, imax; __m128i e, h, f = zero, max = zero, *S = q->qp + target[i] * slen; // s is the 1st score vector h = _mm_load_si128(H0 + slen - 1); // h={2,5,8,11,14,17,-1,-1} in the above example -- 2.47.3