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Heng Li [Thu, 5 May 2011 23:32:03 +0000 (19:32 -0400)]
fixed a stupid bug
Heng Li [Thu, 5 May 2011 21:44:20 +0000 (17:44 -0400)]
added reverse alignment
Heng Li [Thu, 5 May 2011 19:58:57 +0000 (15:58 -0400)]
more comments
Heng Li [Thu, 5 May 2011 19:39:04 +0000 (15:39 -0400)]
added license and a couple of comments
Heng Li [Thu, 5 May 2011 19:29:02 +0000 (15:29 -0400)]
Added a simple CLI
Heng Li [Thu, 5 May 2011 17:43:16 +0000 (13:43 -0400)]
added a few comments
Heng Li [Thu, 5 May 2011 17:38:26 +0000 (13:38 -0400)]
allocate query profile in one memory block
Heng Li [Thu, 5 May 2011 17:27:18 +0000 (13:27 -0400)]
incorporate ideas from swps3
Heng Li [Thu, 5 May 2011 16:42:29 +0000 (12:42 -0400)]
SSE2 Smith-Waterman; unfinished
Heng Li [Mon, 2 May 2011 02:53:07 +0000 (22:53 -0400)]
bugfix in os.getopt(): "-" not recognized
Heng Li [Sun, 1 May 2011 03:17:56 +0000 (23:17 -0400)]
C verions of Keith's C++ progs; see inner comments
Heng Li [Thu, 21 Apr 2011 16:29:30 +0000 (12:29 -0400)]
all minor changes
Heng Li [Thu, 21 Apr 2011 03:40:52 +0000 (23:40 -0400)]
added Spearman coefficient
Heng Li [Thu, 21 Apr 2011 03:09:23 +0000 (23:09 -0400)]
added Pearson correlation coefficient
Heng Li [Mon, 18 Apr 2011 14:02:00 +0000 (10:02 -0400)]
code cleanup in intvovlp
Heng Li [Mon, 18 Apr 2011 05:47:51 +0000 (01:47 -0400)]
added some comments
Heng Li [Mon, 18 Apr 2011 05:35:16 +0000 (01:35 -0400)]
added quick overlap testing
Heng Li [Mon, 18 Apr 2011 02:06:31 +0000 (22:06 -0400)]
benchmark performance given unaligned memory
Heng Li [Mon, 11 Apr 2011 03:29:45 +0000 (23:29 -0400)]
Added ks_shuffle() and ks_sample()
Heng Li [Thu, 7 Apr 2011 02:39:57 +0000 (22:39 -0400)]
fixed a bug in example
Heng Li [Thu, 7 Apr 2011 00:48:51 +0000 (20:48 -0400)]
changed some comments
Heng Li [Wed, 6 Apr 2011 16:19:14 +0000 (12:19 -0400)]
added table.shuffle()
Heng Li [Wed, 6 Apr 2011 14:23:24 +0000 (10:23 -0400)]
update README
Heng Li [Wed, 6 Apr 2011 14:07:10 +0000 (10:07 -0400)]
Move klua here and rename klua to klib
Heng Li [Mon, 4 Apr 2011 16:15:35 +0000 (12:15 -0400)]
benchmark mergesort on sorted arrays
Heng Li [Mon, 14 Feb 2011 21:33:27 +0000 (16:33 -0500)]
Allow to init global functions (0.2.5)
Heng Li [Sat, 12 Feb 2011 23:52:08 +0000 (18:52 -0500)]
accelerate kstrtok()
Heng Li [Sun, 30 Jan 2011 02:55:39 +0000 (21:55 -0500)]
avoid a segfault when connection fails
Heng Li [Mon, 17 Jan 2011 00:37:21 +0000 (19:37 -0500)]
Change /2 to >>1. Surprisingly this improves the speed...
Heng Li [Fri, 14 Jan 2011 01:41:07 +0000 (20:41 -0500)]
Updated README
Attractive Chaos [Thu, 13 Jan 2011 18:41:47 +0000 (13:41 -0500)]
Changed all to most
Attractive Chaos [Thu, 13 Jan 2011 18:20:28 +0000 (13:20 -0500)]
Update README
Attractive Chaos [Thu, 13 Jan 2011 18:10:52 +0000 (13:10 -0500)]
Added the knhx library
Attractive Chaos [Thu, 13 Jan 2011 18:05:35 +0000 (13:05 -0500)]
Added the kfunc library
Attractive Chaos [Thu, 13 Jan 2011 17:55:01 +0000 (12:55 -0500)]
Added the khmm library
Attractive Chaos [Thu, 13 Jan 2011 17:53:26 +0000 (12:53 -0500)]
Added the knetfile library
Attractive Chaos [Thu, 13 Jan 2011 17:47:54 +0000 (12:47 -0500)]
Added kvec.h and klist.h
Attractive Chaos [Thu, 13 Jan 2011 17:44:38 +0000 (12:44 -0500)]
Added the license to kmin
Attractive Chaos [Thu, 13 Jan 2011 17:42:40 +0000 (12:42 -0500)]
Added the kmin library
Attractive Chaos [Thu, 13 Jan 2011 17:36:26 +0000 (12:36 -0500)]
Added kseq.h
Attractive Chaos [Thu, 13 Jan 2011 17:32:38 +0000 (12:32 -0500)]
Added the license information for ksort.h and kstring.h
Attractive Chaos [Thu, 13 Jan 2011 17:28:46 +0000 (12:28 -0500)]
Added the kstring library
Attractive Chaos [Thu, 13 Jan 2011 17:26:59 +0000 (12:26 -0500)]
nothing
Attractive Chaos [Thu, 13 Jan 2011 17:25:08 +0000 (12:25 -0500)]
Added ksort.h
Attractive Chaos [Thu, 13 Jan 2011 17:23:07 +0000 (12:23 -0500)]
Added kbtree.h
Attractive Chaos [Thu, 13 Jan 2011 17:18:28 +0000 (12:18 -0500)]
Added khash.h
Attractive Chaos [Thu, 13 Jan 2011 17:12:45 +0000 (12:12 -0500)]
first commit
projects / klib.git / log